Course: Bioinformatics and Computational Biology Solutions Using R and Bioconductor

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Schedule


Session Topic Activites
1 Introduction to Molecular Biology and Array Technology Lecture
2 Introduction to R Lab
3 Introduction to Differential Expression Lecture
4 Introduction to Bioconductor Lab
5 Probe Level Data and Background Adjustments Lecture
6 Bioconductor R, Emacs, ESS Catch Up Lab
7 Normalization Lecture
8 limma Lab
9 Advanced Differentail Exprresion: Introduction to Emprical Bayes, Mutliple Comparasons Lecture
10 limma and SAM Lab
11 Distances, Clustering, and Prediction Lecture
12 Heatmaps and MLInterfaces Lab
13 Pre-processing Affymetrix GeneChips: Expression and SNP Lecture
14 Pre-processing Affymetrix GeneChips Lab
15 Annotation Lecture
16 Pre-processing ctd and Annotation Lab